Genome Analysis
- Identification of Structural Variation
- Methods for RNA Isolation, Characterization, and Sequencing
- Transcriptome Reconstruction and Quantification from RNA Sequencing Data
- Identification of Small Interfering RNA from Next-generation Sequencing Data
- Motif Discovery and Motif Finding in ChIP-Seq Data
- Mammalian Enhancer Prediction
- DNA Patterns for Nucleosome Positioning
- Hypermethylation in Cancer
- Identification and Analysis of Transposable Elements in Genomic Sequences
- The Current State of Metagenomic Analysis
- Metatranscriptomics
- Inferring Viral Quasispecies Spectra from Shotgun and Amplicon Next-generation Sequencing Reads
- DNA Instability in Bacterial Genomes: Causes and Consequences
- Comparative Methods For RNA Structure Prediction
- Context-free Grammars and RNA Secondary Structure Prediction
- Stochastic Context-free Grammars and RNA Secondary Structure Prediction
- Genome Analysis
